Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015945287.1_cds_XP_016487840.1_78533
CDS Infomation

[gene=LOC107807900] [db_xref=GeneID:107807900] [protein=PAN domain-containing protein At5g03700-like] [protein_id=XP_016487840.1] [location=12006..13508] [gbkey=CDS]
Sequence

ATGGAAATAGTTAACTCAGTAACTCGTTTGAAGGTAACTCATATTTTCTTGATTTCCATT
TTTTTCACAAATTTTTACTGGTTTAATATTGGAGCTGAATCTACCAAAGAGCTTTTCAAA
GGATTTAAAGCAACCCCAGATTCTCATATTTCAACTTTTCAACCTCTTCTTACTGATTCT
ACTGGTAATTACTCATTGAGTTTTCTCCGAGTTGAAAAAGATCAACTCACTCTTTCTATT
ATTCATGTTCCATCTTCTGAGTCAATATGGGTTGCTAACTTGACCCGTTTTGCAAGATGG
GATGACCCGACTGAGTTGTTCTTCAATGGCAGTCTTGTGTTGTCGGATTCTCGTTCAGGG
GTATTTTGGTCAACTCATACTAATGGAGACCGTGTTTGGCTTTCAAATACGTCAAATTTG
CAAGTTCAAAAGGTTGATAGTGGAATGAGGTTAAATTCTGTTTTGTGGCAAAGTTTTGAT
TTTCCCTCAGATACCCTTGTGGAAAATCAAAATTTCACAAATAAAATGACTTTGGTTTCG
TCCAATGGGCTTTATTCCATGAGTTTGGGCTTTGATTTTTTCGGGTTGTATGCCAAGTCC
AAGGACGAAGCGGGTTCGGTTTCGGGTCCGGGTCGGATCTATTGGAAGCACAAGGCATTA
GAAGCAAAAGCTGATGTTATTGAAGGTCAAGGACCAATTTATGCTGTATTAAAGTCAGAT
GGTTTTTTTGGTATGTACCAAAATGAGTCAGTTCCAGTTGATGTAGAATCTTTTAACAGT
TTTCAACAACCCGTATCCGGTGTCCGTCGGATCCGGGTCGAACCGGATGGGAATTTGAAA
GGATATTTTTGGGCCGGGTCAAGTTGGATATTGGACTACCAAGCAATAAAGGAAACATGT
GAATTGCCTAATCCTTGTGGTATATATGGACTCTGTCAACCGGGCAAAGGTTGTTCTTGT
CTAGACAATAGTACGGATTACAACTCCGGCCGGTGTGTCTCGCCGGAAAATCAAGATTCC
GGCGACTTTTGTGGGGTTTATGATCATAAAAAGTACAAGGGTTTTTCAAGAAATGGTGTT
GAATTGCCTAATAAGGAGTTAATGACTTACCAAAAAATGGTTTCTTTTCAAGAATGTCAA
AGTACATGTGAAGGAAATTGTACATGTTGGGGTGTGGTGTATACTAATACATCTGGATTT
TGCTACATACTAGACTACCCCATACAAAGTTTAGTAGGAGTAGGGGATGAATCCAAGATG
GGATATTTCAAAGTGAGGGAAGGTGTAGGGAAAGATAAGGTGGAGGTGGGGTTAGGGGTA
GGGATAGGGTTATTATGTGGGGCCATATTGGTATTTGGTGGGGTCATAGGGTTAGGGTTG
TATAGATATAGGAAAAGAAAAAGAGGTGTGACTGGATATGTAGAAGAAGATGGAATGGTA
GTTGGACCATACAAAGAAATGAGAAATGCAAGTTTTAGGTCAATTGAACTAAGTGAAAGA
TGA

Peptide Sequence

PEP ID

XP_016487840.1
PEP Infomation

PREDICTED: PAN domain-containing protein At5g03700-like [Nicotiana tabacum]
Sequence

MEIVNSVTRLKVTHIFLISIFFTNFYWFNIGAESTKELFKGFKATPDSHISTFQPLLTDS
TGNYSLSFLRVEKDQLTLSIIHVPSSESIWVANLTRFARWDDPTELFFNGSLVLSDSRSG
VFWSTHTNGDRVWLSNTSNLQVQKVDSGMRLNSVLWQSFDFPSDTLVENQNFTNKMTLVS
SNGLYSMSLGFDFFGLYAKSKDEAGSVSGPGRIYWKHKALEAKADVIEGQGPIYAVLKSD
GFFGMYQNESVPVDVESFNSFQQPVSGVRRIRVEPDGNLKGYFWAGSSWILDYQAIKETC
ELPNPCGIYGLCQPGKGCSCLDNSTDYNSGRCVSPENQDSGDFCGVYDHKKYKGFSRNGV
ELPNKELMTYQKMVSFQECQSTCEGNCTCWGVVYTNTSGFCYILDYPIQSLVGVGDESKM
GYFKVREGVGKDKVEVGLGVGIGLLCGAILVFGGVIGLGLYRYRKRKRGVTGYVEEDGMV
VGPYKEMRNASFRSIELSER

Transcript Sequence

Gene sequence data has not been registered.